Generation and analysis of an Eucalyptus globulus cDNA library constructed from seedlings subjected to low temperature conditions

dc.contributor.authorRasmussen-Poblete, Susana
dc.contributor.authorValdes, Jorge
dc.contributor.authorGamboa, Maria Cecilia
dc.contributor.authorValenzuela, Pablo D.T.
dc.contributor.authorKrauskopf, Erwin
dc.date.accessioned2014-03-21T16:32:20Z
dc.date.accessioned2016-05-31T18:06:22Z
dc.date.available2014-03-21T16:32:20Z
dc.date.available2016-05-31T18:06:22Z
dc.date.issued2008
dc.descriptionIndexación: Scieloes
dc.description.abstractEucalyptus globulus is the most important commercial temperate hardwood in the world because of its wood properties and due to its characteristics for biofuel production. However, only a very low number of expressed sequence tags (ESTs) are publicly available for this tree species. We constructed a cDNA from E. globulus seedlings subjected to low temperature and sequenced 9,913 randomly selected clones, generating 8,737 curated ESTs. The assembly produced 1,062 contigs and 3,879 singletons forming a Eucalyptus unigene set. Based on BLASTX analysis, 89.3% of the contigs and 88.5% of the singletons had significant similarity to known genes in the non-redundant database of GenBank. The Eucalyptus unigene set generated is a valuable public resource that provides an initial model for genes and regulatory pathways involved in cell wall biosynthesis at low temperature.es
dc.description.sponsorshipFinancial support: This work was partially funded by Universidad Andrés Bello (DI Proyect: 04-05/1) and MIFAB (Proyect: P04-071-F) and by the Microsoft Joint Research Program.es
dc.identifier.citationElectronic Journal of Biotechnology. Vol. 11. N° 2. Valparaíso, 2008.es
dc.identifier.issn0717-3458
dc.identifier.urihttp://repositorio.unab.cl/xmlui/handle/ria/2424
dc.language.isoenes
dc.publisherPontificia Universidad Católica de Valparaísoes
dc.subjectcellulose, cold-temperature, EST database, forest biotechnology, lignin.es
dc.titleGeneration and analysis of an Eucalyptus globulus cDNA library constructed from seedlings subjected to low temperature conditionses
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